How to Delete Shopify Store Permanently, Remove One of the Connected Stores Easily 2026
By Impran M N
Permanently deleting a Shopify store, or removing just one of several connected stores, requires closing it correctly through the Shopify admin so billing actually stops and it no longer appears in your store list. This guide covers the deactivation process along with what to check beforehand, like exporting data and canceling apps, to avoid surprises later. It applies whether you're closing your main store or a secondary connected one.
01Decide when and why to delete your store
Before closing anything, confirm this is the right move, since deactivation stops billing and removes the store from your account.
02Open Shopify admin settings
Navigate into your Shopify admin where store management and closure options are located.
03Go to store management options
Find the section of settings dedicated to managing or closing the store, which is separate from general store preferences.
04Select "Deactivate store" and confirm
Choose the deactivate option and confirm your choice, which begins the process of permanently closing the store.
05Complete final confirmation and closure
Finish the closure process to ensure the store is fully removed from your account and billing has stopped.
Frequently asked questions
Will deleting my Shopify store stop billing immediately?
Deactivating the store through the proper admin steps is what stops billing, so following the full closure process matters to avoid future charges.
Should I export my data before deleting the store?
Yes, it's recommended to export important data and cancel any connected apps before deactivating the store.
Can I remove one connected store without affecting my main store?
Yes, this process works for both your main store and any additional connected stores on your account.
What happens to my domain after I delete the store?
Domain settings need to be checked separately before deletion to avoid unexpected issues or continued charges tied to the domain.
Is store deletion reversible?
The guide frames this as a permanent closure process, so it's important to complete the pre-checks like data export before confirming deactivation.
Watch the full walkthrough
The same steps, demonstrated on screen from start to finish.



